"Digital Twins” are digital representations of real world objects using structured, machine readable data.
Isolated and targeted studies on plants investigate specific conditions, tissues, or species. We see promise in integrating the data from those studies with models in order to create a "Digital Twin", that would provide a holistic picture of plant physiology.
Applications can include plant growth models, understanding of pesticide absorption, distribution, metabolism and excretion (ADME), mode of action, and understanding of resistance development.
A "Digital Twin" solution would enable the creation of customized modeling pipelines over a unitary data and modeling architecture, for example, to identify the role a gene or a set of genes plays in combination with environmental conditions for the occurrence of a certain phenotype.
A "Digital Twin" of a plant would incorporate data and information at different anatomic levels, including data from proteomics, metabolomics, genomics, transcriptomics, as well as comprehensive gene annotation, associated phenotypes, and known interactions with chemicals. This data can be sourced from public databases and literature, but also from internal experiments.
Knowledge graphs excel at capturing the complexity of the real world, and they store information in a way that’s intuitive and are an ideal way to model "digital twin" data.
BASF is seeking graph-based building and model-querying technologies that can be applied to model plants. We are also looking for large-language models and methods to integrate data from different physiological levels and different plants. We are open to partnering on earlier-stage research to achieve these objectives "from the ground up" or identifying partners with existing solutions.
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