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Monitoring microbial activity in agricultural systems
  • Background
  • What we're looking for
  • What we can offer you
  • Who we are
  • Q&A
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Background

Biological crop inputs and regenerative agriculture practices are increasingly used to support plant health by influencing soil microbial communities and processes. Yet their effects are hard to verify in real time on farms. Growers often apply a biological product without a practical way to confirm it is active in soil, persisting as intended, or delivering measurable impact, making it hard to optimize application timing, dosage, or management practices. 

 

In principle, soil biology can be assessed with laboratory assays (e.g., microbial profiling, metabolite testing), but these methods are not feasible at scale for smallholder systems. Sending samples to centralized labs adds cost, delays, and logistical burden, and often requires manual preparation and repeat field visits. In practice, many in-field probes rely on electrical conductivity or ion proxies, but these signals are influenced by dissolved salts (e.g., from soluble fertilizers and irrigation water) and require site-specific calibration, making them poor indicators of microbial activity. 

 

A practical, automated, in-soil sensing approach is needed to provide interpretable indicators of biological activity or “microbial fingerprints”, such as volatile organic compounds (VOCs), spectral signatures, or other validated proxies. Such technology could enable monitoring across large grower networks and diverse soils, support in-season decisions, and increase confidence that biological and regenerative interventions are functioning as intended.

What we're looking for

We are looking for innovative sensing solutions that can operate directly in soil to provide practical indicators of microbial activity or biological product performance under field conditions. The ideal approach would enable automated in situ monitoring and integrate with existing digital farming hardware and data systems used by growers.

Solutions of interest include:
  • VOC sensor or “electronic nose” for microbial fingerprinting
  • Spectroscopy probe for biological activity proxies
  • Automated soil respiration and metabolic activity sensors
  • Electrochemical probes for microbial metabolic signals
  • Microfluidic in-soil biosensing systems
  • Hybrid multi-sensor soil biology monitoring systems
Our must-have requirements are:
  • Supporting evidence or clear scientific rationale linking the measured signal to soil microbial activity or changes associated with biological product application
  • Operates directly in soil with automated measurements and no manual sample preparation after deployment
  • Suitable for scalable deployment in agricultural field conditions with minimal user intervention (initial calibration or periodic maintenance acceptable)
Our nice-to-have's are:
  • Compact, durable design suitable for long-term deployment
  • Provides clear, interpretable outputs that support practical decision-making
  • Ability to integrate with existing farm sensor hardware or environmental monitoring platforms
  • Capability to transmit data remotely through existing farm connectivity or telemetry systems
  • Easy installation and setup suitable for deployment across many farms with limited technical support
  • Includes or supports a user interface or dashboard for visualization and interpretation of sensor data
What's out of scope:
  • Solutions requiring manual soil sampling or routine human operation for each measurement
Acceptable technology readiness levels (TRL):
Levels 3-9
What we can offer you
Eligible partnership models:
Co-developmentSupply/purchase
Benefits:
Compensation
Funding is proposal-dependent, with budget available to support prototype development, validation studies, or potential technology acquisition. Selected partners may work with Bayer teams to further develop technologies toward field deployment and commercialization.
Expertise
Selected partners may collaborate with Bayer scientists and agronomy experts with experience in soil biology, biological crop inputs, and digital agriculture systems to provide feedback and guidance throughout the project.
Tools and Technologies
Access to relevant Bayer tools, technologies, and technical capabilities may be provided on a case-by-case basis to support development, testing, or integration of proposed sensing solutions.
Compounds and Reagents
Access to relevant biological materials or related reagents may be considered on a case-by-case basis to support validation of sensing approaches in soil systems.
Data
Partners may have opportunities to collaborate with Bayer teams using relevant agronomic or environmental datasets to support validation or interpretation of sensing outputs, where appropriate.
Facilities and Services
Opportunities may exist to evaluate promising technologies through collaborative testing in Bayer research environments or field trial settings, depending on the proposal and stage of development.
Networking
Selected partners may have opportunities to connect with Bayer Crop Science researchers and digital agriculture teams, enabling collaboration and exposure to experts working in soil health, biologicals, and precision agriculture.
Who we are

Bayer’s vision of #HealthForAll, #HungerForNone drives our need to strengthen innovation capabilities in all areas of agriculture. We know we can’t accomplish this alone, so we're always interested to hear about novel, early-stage scientific innovations that can contribute to feeding the world without starving the planet. You have our commitment to take a look, match with our R&D priorities and provide you timely feedback.

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Reviewers
Q&A with Bayer Crop Science

The Q&A is now closed.

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Q.
We have a TRL5/6 rapid pulse crop fungal pathogen detection platform system would this be of interest to your program?
4
A.
Yes - please submit your proposal.
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Julio Lopez, Digital Farming Solutions Manager NORLA, Bayer Crop Science
April 1, 2026
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Q.
i work with voc gas sensors in ambeint science , we wanna adapt to soil monitoring, is it worthy to send the proposal?
1
A.
Please do!
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Julio Lopez, Digital Farming Solutions Manager NORLA, Bayer Crop Science
April 10, 2026
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Q.
We developed a fluorescent probe (GFP-fusion protein) that specifically detects R. leguminosarum in concentrated soil samples (TRL5). Could this be of interest to you?
1
A.
Yes, please submit your proposal.
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Julio Lopez, Digital Farming Solutions Manager NORLA, Bayer Crop Science
April 10, 2026
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